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Yes, removing the horiz output will disable the HV. The voltages you measure on the PS will probably be a little high, because the horiz, HV and CRT draw quite a bit of current.
For alignment and so on, you can load the PS with a 2000 ohm 100 watt resistor. Probably not necessary for this though.
Dunno about the tuner. Is it strips or wafer switches?
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